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Towards Enhanced Retrieval of Biological Models through Annotation-Based Ranking
7 references·0 citing·20 second hop
Towards Enhanced Retrieval of Biological Models through Annotation-Based Ranking (2009)Towards Enhanced Retrieval of Biological …The CellML Model Repository (2008)The CellML Model RepositorySED-ML – An XML Format for the Implementation of the MIASE Guidelines (2008)SED-ML – An XML Format for th…Systems biology standards—the community speaks (2007)Systems biology standards—the…Model storage, exchange and integration (2006)Model storage, exchange and i…Towards Reusing Model Components in Systems Biology (2005)Towards Reusing Model Compone…ModelDB: Making Models Publicly Accessible to Support Computational Neuroscience (2003)ModelDB: Making Models Public…Issues in Enhancing Model Reuse (2000)Issues in Enhancing Model Reu…The DoD high level architecture: an update (1998)Observations on the complexity of composable simulation (1999)Effective simulation model reuse: a case study for AMHS modeling (2002)Multifacetted Modelling and Discrete Event Simulation (1985)The Human Brain Project: neuroinformatics tools for integrating, searching and modeling multidisciplinary neuroscience data (1998)Why Are Computational Neuroscience and Systems Biology So Separate? (2008)Reproducibility in Computational Neuroscience Models and Simulations (2016)Replicability or reproducibility? On the replication crisis in computational neuroscience and sharing only relevant detail (2018)A Discussion on Experimental Model Validation (2009)Learning from the Past: Approaches for Reproducibility in Computational Neuroscience (2013)Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) (2014)Reproducibility of Model-Based Results in Systems Biology (2013)The evolution of standards and data management practices in systems biology (2015)Adapting modeling and simulation credibility standards to computational systems biology (2023)An overview of the CellML API and its implementation (2010)The Physiome Model Repository 2 (2011)Reproducibility in systems biology modelling (2021)BioModels.net Web Services, a free and integrated toolkit for computational modelling software (2009)A-R-E: The Author-Review-Execute Environment (2011)How Modeling Standards, Software, and Initiatives Support Reproducibility in Systems Biology and Systems Medicine (2016)
this work references cited by second hop

References

  • 2008The CellML Model Repository276 cited
  • 2003ModelDB: Making Models Publicly Accessible to Support Computational Neuroscience115 cited
  • 2006Model storage, exchange and integration97 cited
  • 2007Systems biology standards—the community speaks88 cited
  • 2008SED-ML – An XML Format for the Implementation of the MIASE Guidelines64 cited
  • 2000Issues in Enhancing Model Reuse34 cited
  • 2005Towards Reusing Model Components in Systems Biology8 cited

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