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Instrumentation and Trace Analysis for Ad-Hoc Python Workflows in Cloud Environments
12 references·0 citing·44 second hop
Instrumentation and Trace Analysis for Ad-Hoc Python Workflows in Cloud Environments (2015)Instrumentation and Trace Analysis for Ad…noWorkflow: Capturing and Analyzing Provenance of Scripts (2015)noWorkflow: Capturing and Ana…ProvenanceCurious (2013)ProvenanceCuriousTavaxy: Integrating Taverna and Galaxy workflows with cloud computing support (2012)Tavaxy: Integrating Taverna a…Using automatic persistent memoization to facilitate data analysis scripting (2011)Using automatic persistent me…Mining program workflow from interleaved traces (2010)Mining program workflow from …Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Reasoning on Scientific Workflows (2009)Reasoning on Scientific Workf…Differencing Provenance in Scientific Workflows (2009)Differencing Provenance in Sc…ProtocolDB: Storing Scientific Protocols with a Domain Ontology (2007)ProtocolDB: Storing Scientifi…Taverna: a tool for building and running workflows of services (2006)Taverna: a tool for building …Workflow mining: discovering process models from event logs (2004)Workflow mining: discovering …Mining process models from workflow logs (1998)Mining process models from wo…An overview of workflow management: From process modeling to workflow automation infrastructure (1995)Discovering models of software processes from event-based data (1998)Business Process Intelligence (2003)Business process mining: An industrial application (2006)Workflow Patterns (2003)Galaxy: A platform for interactive large-scale genome analysis (2005)Capturing and querying workflow runtime provenance with PROV (2013)Dynamic steering of HPC scientific workflows: A survey (2014)Human Information Processing (2016)Scientific Workflows (2016)Querying and re-using workflows with VsTrails (2008)A Quick Guide to Organizing Computational Biology Projects (2009)Using Introspection to Collect Provenance in R (2018)SciInc: A Container Runtime for Incremental Recomputation (2019)Integrated Reproducibility with Self-describing Machine Learning Models (2023)THE APPLICATION OF PETRI NETS TO WORKFLOW MANAGEMENT (1998)The ProM Framework: A New Era in Process Mining Tool Support (2005)Conformance checking of processes based on monitoring real behavior (2007)Fuzzy Mining – Adaptive Process Simplification Based on Multi-perspective Metrics (2007)Managing Rapidly-Evolving Scientific Workflows (2006)Process Equivalence: Comparing Two Process Models Based on Observed Behavior (2006)Quantifying process equivalence based on observed behavior (2007)Fine-grained and efficient lineage querying of collection-based workflow provenance (2010)Efficient recovery of missing events (2013)Cleaning structured event logs: A graph repair approach (2015)Process mining: a research agenda (2003)Discovering Interacting Artifacts from ERP Systems (2015)Formal Modeling and Discovery of Multi-instance Business Processes: A Cloud Resource Management Case Study (2022)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Nextflow enables reproducible computational workflows (2017)Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Characterization of scientific workflows (2008)The iPlant Collaborative: Cyberinfrastructure for Plant Biology (2011)The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud (2013)Provenance for Computational Tasks: A Survey (2008)YesWorkflow: A User-Oriented, Language-Independent Tool for Recovering Workflow Information from Scripts (2015)ReproZip (2016)Sustainable computational science: the ReScience initiative (2017)Linking Prospective and Retrospective Provenance in Scripts (2016)Provenance Inference Techniques: Taxonomy, comparative analysis and design challenges (2018)Towards integration of data-driven agronomic experiments with data provenance (2019)
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References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2004Workflow mining: discovering process models from event logs2,206 cited
  • 2006Taverna: a tool for building and running workflows of services944 cited
  • 1998Mining process models from workflow logs799 cited
  • 2015noWorkflow: Capturing and Analyzing Provenance of Scripts129 cited
  • 2012Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support120 cited
  • 2010Mining program workflow from interleaved traces106 cited
  • 2009Differencing Provenance in Scientific Workflows63 cited
  • 2011Using automatic persistent memoization to facilitate data analysis scripting35 cited
  • 2013ProvenanceCurious21 cited
  • 2007ProtocolDB: Storing Scientific Protocols with a Domain Ontology15 cited
  • 2009Reasoning on Scientific Workflows13 cited

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