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FireWorks: a dynamic workflow system designed for high‐throughput applications
4 references·16 citing·33 second hop
FireWorks: a dynamic workflow system designed for high‐throughput applications (2015)FireWorks: a dynamic workflow system desi…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Scientific workflow management and the Kepler system (2005)Scientific workflow managemen…Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Taverna: a tool for the compo…Kepler: An Extensible System for Design and Execution of Scientific Workflows (2004)Kepler: An Extensible System …Jobflow: Computational Workflows Made Simple (2024)Jobflow: Computational Workfl…AlabOS: a Python-based reconfigurable workflow management framework for autonomous laboratories (2024)AlabOS: a Python-based reconf…SimStack: An Intuitive Workflow Framework (2022)SimStack: An Intuitive Workfl…Generalizable coordination of large multiscale workflows (2021)Generalizable coordination of…Workflows in AiiDA: Engineering a high-throughput, event-based engine for robust and modular computational workflows (2020)Workflows in AiiDA: Engineeri…Towards molecular simulations that are transparent, reproducible, usable by others, and extensible (TRUE) (2020)Towards molecular simulations…AiiDA 1.0, a scalable computational infrastructure for automated reproducible workflows and data provenance (2020)AiiDA 1.0, a scalable computa…Semantic Interoperability and Characterization of Data Provenance in Computational Molecular Engineering (2019)Semantic Interoperability and…QMflows: A Tool Kit for Interoperable Parallel Workflows in Quantum Chemistry (2019)QMflows: A Tool Kit for Inter…pyiron: An integrated development environment for computational materials science (2019)pyiron: An integrated develop…Toward Understanding I/O Behavior in HPC Workflows (2018)Toward Understanding I/O Beha…Simple data and workflow management with the signac framework (2018)Simple data and workflow mana…signac: A Python framework for data and workflow management (2018)signac: A Python framework fo…DagOn*: Executing Direct Acyclic Graphs as Parallel Jobs on Anything (2018)DagOn*: Executing Direct Acyc…A characterization of workflow management systems for extreme-scale applications (2017)A characterization of workflo…The MAterials Simulation Toolkit (MAST) for atomistic modeling of defects and diffusion (2016)The MAterials Simulation Tool…Workflow Management (2002)Workflow Patterns (2003)Taverna: lessons in creating a workflow environment for the life sciences (2005)Provenance and scientific workflows (2008)The iPlant Collaborative: Cyberinfrastructure for Plant Biology (2011)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Nextflow enables reproducible computational workflows (2017)Taverna: a tool for building and running workflows of services (2006)Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists (2010)Scientific workflows: Past, present and future (2017)StreamFlow: Cross-Breeding Cloud With HPC (2020)WfCommons: A framework for enabling scientific workflow research and development (2021)AiiDA: automated interactive infrastructure and database for computational science (2015)Like a rainbow in the dark: metadata annotation for HPC applications in the age of dark data (2021)Growth in a Time of Debt (2010)Does high public debt consistently stifle economic growth? A critique of Reinhart and Rogoff (2013)1,500 scientists lift the lid on reproducibility (2016)MoSDeF Cassandra: A complete Python interface for the Cassandra Monte Carlo software (2021)Achieving Reproducibility and Replicability of Molecular Dynamics and Monte Carlo Simulations Using the Molecular Simulation Design Framework (MoSDeF) (2025)Reproducible Research in Computational Science (2011)Materials Cloud, a platform for open computational science (2020)Materials Cloud, a platform for open computational science (2020)A dynamic knowledge graph approach to distributed self-driving laboratories (2024)Mobyle: a new full web bioinformatics framework (2009)myExperiment: a repository and social network for the sharing of bioinformatics workflows (2010)Workflows and e-Science: An overview of workflow system features and capabilities (2008)Ten Simple Rules for Reproducible Computational Research (2013)Coding Non-Visually in Visual Studio Code: Collaboration Towards Accessible Development Environment for Blind Programmers (2023)Advancing Digital Transformation in Material Science: The Role of Workflows Within the MaterialDigital Initiative (2025)Brokering between tenants for an international materials acceleration platform (2023)
this work references cited by second hop

References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2005Scientific workflow management and the Kepler system1,681 cited
  • 2004Taverna: a tool for the composition and enactment of bioinformatics workflows1,602 cited
  • 2004Kepler: An Extensible System for Design and Execution of Scientific Workflows745 cited

Cited by

  • 2020AiiDA 1.0, a scalable computational infrastructure for automated reproducible workflows and data provenance345 cited
  • 2020Workflows in AiiDA: Engineering a high-throughput, event-based engine for robust and modular computational workflows166 cited
  • 2019pyiron: An integrated development environment for computational materials science155 cited
  • 2018Simple data and workflow management with the signac framework150 cited
  • 2017A characterization of workflow management systems for extreme-scale applications149 cited
  • 2020Towards molecular simulations that are transparent, reproducible, usable by others, and extensible (TRUE)58 cited
  • 2019QMflows: A Tool Kit for Interoperable Parallel Workflows in Quantum Chemistry53 cited
  • 2016The MAterials Simulation Toolkit (MAST) for atomistic modeling of defects and diffusion45 cited
  • 2024Jobflow: Computational Workflows Made Simple41 cited

Only edges whose both ends are imported exist here. Widen the year window, or show the whole map. Back to the work

2019
Semantic Interoperability and Characterization of Data Provenance in Computational Molecular Engineering
41 cited
  • 2022SimStack: An Intuitive Workflow Framework38 cited
  • 2024AlabOS: a Python-based reconfigurable workflow management framework for autonomous laboratories34 cited
  • 2018signac: A Python framework for data and workflow management34 cited
  • 2018DagOn*: Executing Direct Acyclic Graphs as Parallel Jobs on Anything34 cited
  • 2021Generalizable coordination of large multiscale workflows28 cited
  • 2018Toward Understanding I/O Behavior in HPC Workflows26 cited