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A Hadoop-Galaxy adapter for user-friendly and scalable data-intensive bioinformatics in Galaxy
4 references·2 citing·19 second hop
A Hadoop-Galaxy adapter for user-friendly and scalable data-intensive bioinformatics in Galaxy (2014)A Hadoop-Galaxy adapter for user-friendly…Dissemination of scientific software with Galaxy ToolShed (2014)Dissemination of scientific s…The big challenges of big data (2013)The big challenges of big dataGalaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Taverna: lessons in creating a workflow environment for the life sciences (2005)Taverna: lessons in creating …Managing genomic variant calling workflows with Swift/T (2019)Managing genomic variant call…Data-Intensive Computing Infrastructure Systems for Unmodified Biological Data Analysis Pipelines (2015)Data-Intensive Computing Infr…Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012)Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud (2015)Practical Computational Reproducibility in the Life Sciences (2017)Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities (2017)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Workflow Patterns (2003)Scientific workflow management and the Kepler system (2005)Provenance for Computational Tasks: A Survey (2008)The design and realisation of the Virtual Research Environment for social sharing of workflows (2008)A survey on provenance: What for? What form? What from? (2017)Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Snakemake—a scalable bioinformatics workflow engine (2012)Nextflow enables reproducible computational workflows (2017)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)Visualizing and interacting with large-volume biodiversity data using client–server web-mapping applications: The design and implementation of antmaps.org (2016)Next-Generation Big Data Analytics: State of the Art, Challenges, and Future Research Topics (2017)From conventional group decision making to large-scale group decision making: What are the challenges and how to meet them in big data era? A state-of-the-art survey (2019)
this work references cited by second hop

References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2013The big challenges of big data1,232 cited
  • 2005Taverna: lessons in creating a workflow environment for the life sciences656 cited
  • 2014Dissemination of scientific software with Galaxy ToolShed257 cited

Cited by

  • 2019Managing genomic variant calling workflows with Swift/T8 cited
  • 2015Data-Intensive Computing Infrastructure Systems for Unmodified Biological Data Analysis Pipelines4 cited

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