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Scalable and cost-effective NGS genotyping in the cloud
4 references·1 citing·23 second hop
Scalable and cost-effective NGS genotyping in the cloud (2015)Scalable and cost-effective NGS genotypin…Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline (2014)Launching genomics into the c…Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support (2012)Tavaxy: Integrating Taverna a…Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012)Next-generation sequencing da…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…A new paradigm for the scientific enterprise: nurturing the ecosystem (2018)A new paradigm for the scient…Creating a bioinformatics nation (2002)Mobyle: a new full web bioinformatics framework (2009)Dissemination of scientific software with Galaxy ToolShed (2014)Nonindependence and sensitivity analyses in ecological and evolutionary meta‐analyses (2017)Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities (2017)Workflow Patterns (2003)Galaxy: A platform for interactive large-scale genome analysis (2005)Capturing and querying workflow runtime provenance with PROV (2013)Dynamic steering of HPC scientific workflows: A survey (2014)Human Information Processing (2016)Scientific Workflows (2016)Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists (2010)A case study for cloud based high throughput analysis of NGS data using the globus genomics system (2014)Parallel computing in genomic research: advances and applications (2015)systemPipeR: NGS workflow and report generation environment (2016)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Nextflow enables reproducible computational workflows (2017)Governing the Commons (1990)Metaphors We Live By (2003)8 Decolonizing Methodologies: Research and Indigenous Peoples (2024)
this work references cited by second hop

References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2012Next-generation sequencing data interpretation: enhancing reproducibility and accessibility318 cited
  • 2014Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline221 cited
  • 2012Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support120 cited

Cited by

  • 2018A new paradigm for the scientific enterprise: nurturing the ecosystem9 cited

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