SZodixStudyAcademic Library
ShelvesOpen access
Study · an open academic library·Metadata from OpenAlex (CC0)·Shelves·OpenAlex metadata, de-duplicated
Galaxy: A platform for interactive large-scale genome analysis
0 references·16 citing·37 second hop
Galaxy: A platform for interactive large-scale genome analysis (2005)Galaxy: A platform for interactive large-…The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update (2024)The Galaxy platform for acces…The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update (2022)The Galaxy platform for acces…Towards reproducible computational drug discovery (2020)Towards reproducible computat…The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)The Galaxy platform for acces…Reproducibility in Scientific Computing (2018)Reproducibility in Scientific…The future of scientific workflows (2017)The future of scientific work…Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities (2017)Scientific workflows for comp…Create, run, share, publish, and reference your LC–MS, FIA–MS, GC–MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics (2017)Create, run, share, publish, …Tools and techniques for computational reproducibility (2016)Tools and techniques for comp…The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)The Galaxy platform for acces…Managing, Analysing, and Integrating Big Data in Medical Bioinformatics: Open Problems and Future Perspectives (2014)Managing, Analysing, and Inte…Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline (2014)Launching genomics into the c…Ten Simple Rules for Reproducible Computational Research (2013)Ten Simple Rules for Reproduc…Mobyle: a new full web bioinformatics framework (2009)Mobyle: a new full web bioinf…Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges (2008)Towards a cyberinfrastructure…A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly (2007)A framework for collaborative…Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Reproducible Research in Computational Science (2011)Reproducibility in Science (2014)Good enough practices in scientific computing. (2017)Preferred reporting items for systematic reviews and meta‐analyses in ecology and evolutionary biology: a PRISMA extension (2021)Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists (2010)Parallel computing in genomic research: advances and applications (2015)Scalable and cost-effective NGS genotyping in the cloud (2015)systemPipeR: NGS workflow and report generation environment (2016)Kepler: An Extensible System for Design and Execution of Scientific Workflows (2004)Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012)Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud (2015)GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians (2021)Snakemake—a scalable bioinformatics workflow engine (2012)What does research reproducibility mean? (2016)Scientific workflows: Past, present and future (2017)PhenoMeNal: processing and analysis of metabolomics data in the cloud (2018)FAIR Computational Workflows (2019)The Open Provenance Model core specification (v1.1) (2010)Characterizing and profiling scientific workflows (2012)WfCommons: A framework for enabling scientific workflow research and development (2021)Empowering bioinformatics communities with Nextflow and nf-core (2025)Singularity: Scientific containers for mobility of compute (2017)The nf-core framework for community-curated bioinformatics pipelines (2020)Sustainable data analysis with Snakemake (2021)Bioconductor: open software development for computational biology and bioinformatics (2004)1,500 scientists lift the lid on reproducibility (2016)Nextflow enables reproducible computational workflows (2017)Reproducibility in systems biology modelling (2021)A meta-epidemiological assessment of transparency indicators of infectious disease models (2022)Building bioinformatics web applications with Streamlit (2023)Bioconda: sustainable and comprehensive software distribution for the life sciences (2018)Sustainable data analysis with Snakemake (2021)Applying the FAIR Principles to computational workflows (2025)WorkflowHub: a registry for computational workflows (2025)The five pillars of computational reproducibility: bioinformatics and beyond (2023)
this work references cited by second hop

References

No references inside the corpus for this window.

Cited by

  • 2018The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update3,659 cited
  • 2016The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update2,149 cited
  • 2022The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update1,280 cited
  • 2024The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update958 cited
  • 2013Ten Simple Rules for Reproducible Computational Research875 cited
  • 2009Mobyle: a new full web bioinformatics framework310 cited
  • 2014Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline221 cited
  • 2020Towards reproducible computational drug discovery208 cited
  • 2017The future of scientific workflows182 cited
  • 2017Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities181 cited
  • 2014Managing, Analysing, and Integrating Big Data in Medical Bioinformatics: Open Problems and Future Perspectives173 cited
  • 2016Tools and techniques for computational reproducibility169 cited
  • 2008Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges165 cited

Only edges whose both ends are imported exist here. Widen the year window, or show the whole map. Back to the work

  • 2017Create, run, share, publish, and reference your LC–MS, FIA–MS, GC–MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics160 cited
  • 2007A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly158 cited
  • 2018Reproducibility in Scientific Computing149 cited