Articlegold2014

BioJS: an open source standard for biological visualisation – its status in 2014

Manuel Corpas · Rafael C. Jiménez · Seth J Carbon · Alex García · Tatyana Goldberg · John Gómez +13 more

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Scientific Computing and Data Management Genomics and Phylogenetic Studies Genetics, Bioinformatics, and Biomedical Research

Abstract

BioJS is a community-based standard and repository of functional components to represent biological information on the web. The development of BioJS has been prompted by the growing need for bioinformatics visualisation tools to be easily shared, reused and discovered. Its modular architecture makes it easy for users to find a specific functionality without needing to know how it has been built, while components can be extended or created for implementing new functionality. The BioJS community of developers currently provides a range of functionality that is open access and freely available. A registry has been set up that categorises and provides installation instructions and testing facilities at http://www.ebi.ac.uk/tools/biojs/. The source code for all components is available for ready use at https://github.com/biojs/biojs.

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2015Tools and data services registry: a community effort to document bioinformatics resources 2017Four simple recommendations to encourage best practices in research software 2014The BioJS article collection of open source components for biological data visualisation

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