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Toward model-driven engineering principles and practices for model replicability and experiment reproducibility
13 references·0 citing·43 second hop
Toward model-driven engineering principles and practices for model replicability and experiment reproducibility (2014)Toward model-driven engineering principle…The Collage Authoring Environment (2011)The Collage Authoring Environ…SHARE: a web portal for creating and sharing executable research papers (2011)SHARE: a web portal for creat…Reproducible computational biology experiments with SED-ML - The Simulation Experiment Description Markup Language (2011)Reproducible computational bi…Exploring the coming repositories of reproducible experiments (2011)Exploring the coming reposito…A Universal Identifier for Computational Results (2011)A Universal Identifier for Co…A Provenance-Based Infrastructure to Support the Life Cycle of Executable Papers (2011)A Provenance-Based Infrastruc…Accessible Reproducible Research (2010)Accessible Reproducible Resea…Reproducible research and Biostatistics (2009)Reproducible research and Bio…The design and realisation of the Virtual Research Environment for social sharing of workflows (2008)The design and realisation of…Reproducible Research in Computational Harmonic Analysis (2008)Reproducible Research in Comp…Provenance and scientific workflows (2008)Provenance and scientific wor…Reproducible Computational Experiments using Scons (2007)Reproducible Computational Ex…Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Taverna: a tool for the compo…Workflow mining: discovering process models from event logs (2004)A survey of data provenance in e-science (2005)Scientific workflow management and the Kepler system (2005)Artifact-Centric Business Process Models: Brief Survey of Research Results and Challenges (2008)The Open Provenance Model: An Overview (2008)A survey on provenance: What for? What form? What from? (2017)WaveLab and Reproducible Research (1995)Why Most Published Research Findings Are False (2005)Why Most Published Research Findings Are False (2005)Reporting guidelines for simulation‐based research in social sciences (2012)Why Science Is Not Necessarily Self-Correcting (2012)Computational Reproducibility in Archaeological Research: Basic Principles and a Case Study of Their Implementation (2016)Electronic documents give reproducible research a new meaning (1992)Measuring Reproducibility in Computer Systems Research (2014)Bridging the Chasm (2017)Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging (2024)Managing Rapidly-Evolving Scientific Workflows (2006)Provenance for Visualizations: Reproducibility and Beyond (2007)Provenance for Computational Tasks: A Survey (2008)Repeatability and workability evaluation of SIGMOD 2011 (2011)If these data could talk (2017)Reproducibility Using VisTrails (2018)Statistical Analyses and Reproducible Research (2007)myExperiment: a repository and social network for the sharing of bioinformatics workflows (2010)CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing (2011)Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012)How Web 2.0 is changing medicine (2006)In silico research in the era of cloud computing (2010)4 What Is Web 2.0? Design Patterns and Business Models for the Next Generation of Software (2012)Bringing Digital Science Deep Inside the Scientific Article: the Elsevier Article of the Future Project (2014)The Popper Convention: Making Reproducible Systems Evaluation Practical (2017)Taverna: lessons in creating a workflow environment for the life sciences (2005)Workflows For E-Science: Scientific Workflows For Grids (2007)Wings: Intelligent Workflow-Based Design of Computational Experiments (2010)Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities (2017)COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project (2014)Proceedings of the 2017 Winter Simulation Conference (2017)Reproducibility in systems biology modelling (2021)Model Transparency and Validation (2012)Model Transparency and Validation: A Report of the ISPOR-SMDM Modeling Good Research Practices Task Force-7 (2012)Taverna: a tool for building and running workflows of services (2006)Workflows and e-Science: An overview of workflow system features and capabilities (2008)Ten Simple Rules for Reproducible Computational Research (2013)
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References

  • 2004Taverna: a tool for the composition and enactment of bioinformatics workflows1,602 cited
  • 2008Provenance and scientific workflows470 cited
  • 2008The design and realisation of the Virtual Research Environment for social sharing of workflows432 cited
  • 2010Accessible Reproducible Research308 cited
  • 2008Reproducible Research in Computational Harmonic Analysis274 cited
  • 2011Reproducible computational biology experiments with SED-ML - The Simulation Experiment Description Markup Language257 cited
  • 2009Reproducible research and Biostatistics237 cited
  • 2011SHARE: a web portal for creating and sharing executable research papers79 cited
  • 2011The Collage Authoring Environment65 cited
  • 2011A Provenance-Based Infrastructure to Support the Life Cycle of Executable Papers52 cited
  • 2011A Universal Identifier for Computational Results41 cited
  • 2007Reproducible Computational Experiments using Scons34 cited
  • 2011Exploring the coming repositories of reproducible experiments10 cited

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