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Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks
13 references·1 citing·36 second hop
Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks (2016)Neurophysiological analytics for all! Fre…openBIS ELN-LIMS: an open-source database for academic laboratories (2015)openBIS ELN-LIMS: an open-sou…NSDF: Neuroscience Simulation Data Format (2015)NSDF: Neuroscience Simulation…ActivePapers: a platform for publishing and archiving computer-aided research (2015)ActivePapers: a platform for …The Jupyter/IPython architecture: a unified view of computational research, from interactive exploration to communication and publication. (2014)The Jupyter/IPython architect…Policy: NIH plans to enhance reproducibility (2014)Policy: NIH plans to enhance …Neo: an object model for handling electrophysiology data in multiple formats (2014)Neo: an object model for hand…Interactive notebooks: Sharing the code (2014)Interactive notebooks: Sharin…Ten Simple Rules for Reproducible Computational Research (2013)Ten Simple Rules for Reproduc…A universal open-source Electronic Laboratory Notebook (2013)A universal open-source Elect…Open is Not Enough. Let's Take the Next Step: An Integrated, Community-Driven Computing Platform for Neuroscience (2012)Open is Not Enough. Let's Tak…A Multi-Language Computing Environment for Literate Programming and Reproducible Research (2012)A Multi-Language Computing En…Making neurophysiological data analysis reproducible: Why and how? (2011)Making neurophysiological dat…A Review of Electronic Laboratory Notebooks Available in the Market Today (2010)A Review of Electronic Labora…Exploring the Determinants of Blockchain Acceptance for Research Data Management (2022)Exploring the Determinants of…WaveLab and Reproducible Research (1995)Statistical Analyses and Reproducible Research (2007)The Truth, The Whole Truth, and Nothing But the Truth (2016)Reproducible research: a minority opinion (2017)Reproducibility, Replicability and Repeatability: A survey of reproducible research with a focus on high performance computing (2024)Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Galaxy: A platform for interactive large-scale genome analysis (2005)Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Reproducibility in Science (2014)Good enough practices in scientific computing. (2017)Preferred reporting items for systematic reviews and meta‐analyses in ecology and evolutionary biology: a PRISMA extension (2021)The case for open computer programs (2012)Towards an unconscious neural reinforcement intervention for common fears (2018)Multivoxel pattern analysis reveals dissociations between subjective fear and its physiological correlates (2019)Ten simple rules for writing Dockerfiles for reproducible data science (2020)A Laboratory Information Management System (LIMS) for a high throughput genetic platform aimed at candidate gene mutation screening (2007)Digital research environments: a requirements analysis (2023)Digitalization concepts in academic bioprocess development (2024)openBIS: a flexible framework for managing and analyzing complex data in biology research (2011)Implementation and use of cloud-based electronic lab notebook in a bioprocess engineering teaching laboratory (2017)Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic Biology Focus (2017)Abstraction hierarchy to define biofoundry workflows and operations for interoperable synthetic biology research and applications (2025)Tools and techniques for computational reproducibility (2016)Exploratory Research (2020)What's Wrong with Computational Notebooks? Pain Points, Needs, and Design Opportunities (2020)STARD 2015: An Updated List of Essential Items for Reporting Diagnostic Accuracy Studies (2015)STARD 2015: an updated list of essential items for reporting diagnostic accuracy studies (2015)What does research reproducibility mean? (2016)High-Performance Computing in Neuroscience for Data-Driven Discovery, Integration, and Dissemination (2016)Uncertainpy: A Python Toolbox for Uncertainty Quantification and Sensitivity Analysis in Computational Neuroscience (2018)Using Evernote as an Electronic Lab Notebook in a Translational Science Laboratory (2012)Chemotion ELN: an Open Source electronic lab notebook for chemists in academia (2017)Electronic lab notebooks: can they replace paper? (2017)Methods for enhancing the reproducibility of biomedical research findings using electronic health records (2017)The GenePattern Notebook Environment (2017)Tellurium notebooks—An environment for reproducible dynamical modeling in systems biology (2018)
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References

  • 2014Policy: NIH plans to enhance reproducibility1,247 cited
  • 2013Ten Simple Rules for Reproducible Computational Research875 cited
  • 2014Interactive notebooks: Sharing the code227 cited
  • 2014Neo: an object model for handling electrophysiology data in multiple formats154 cited
  • 2012Open is Not Enough. Let's Take the Next Step: An Integrated, Community-Driven Computing Platform for Neuroscience115 cited
  • 2010A Review of Electronic Laboratory Notebooks Available in the Market Today95 cited
  • 2012A Multi-Language Computing Environment for Literate Programming and Reproducible Research90 cited
  • 2014The Jupyter/IPython architecture: a unified view of computational research, from interactive exploration to communication and publication.79 cited
  • 2015openBIS ELN-LIMS: an open-source database for academic laboratories71 cited
  • 2013A universal open-source Electronic Laboratory Notebook24 cited
  • 2011Making neurophysiological data analysis reproducible: Why and how?19 cited
  • 2015ActivePapers: a platform for publishing and archiving computer-aided research19 cited
  • 2015NSDF: Neuroscience Simulation Data Format17 cited

Cited by

  • 2022Exploring the Determinants of Blockchain Acceptance for Research Data Management10 cited

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