Simplified Deployment of Health Informatics Applications by Providing Docker Images.

Matthias Löbe · Thomas Ganslandt · Lydia Lotzmann · Sebastian Mate · Jan Christoph · Benjamin Baum +2 more

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Scientific Computing and Data Management Electronic Health Records Systems Cloud Computing and Resource Management

Abstract

Due to the specific needs of biomedical researchers, in-house development of software is widespread. A common problem is to maintain and enhance software after the funded project has ended. Even if many tools are made open source, only a couple of projects manage to attract a user basis large enough to ensure sustainability. Reasons for this include complex installation and configuration of biomedical software as well as an ambiguous terminology of the features provided; all of which make evaluation of software laborious. Docker is a para-virtualization technology based on Linux containers that eases deployment of applications and facilitates evaluation. We investigated a suite of software developments funded by a large umbrella organization for networked medical research within the last 10 years and created Docker containers for a number of applications to support utilization and dissemination.

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