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Conducting reproducible research with Umbrella: Tracking, creating, and preserving execution environments
12 references·0 citing·40 second hop
Conducting reproducible research with Umbrella: Tracking, creating, and preserving execution environments (2016)Conducting reproducible research with Umb…Repeatability and Benefaction in Computer Systems Research (2017)Repeatability and Benefaction…PRUNE: A preserving run environment for reproducible scientific computing (2016)PRUNE: A preserving run envir…Techniques for Preserving Scientific Software Executions: Preserve the Mess or Encourage Cleanliness? (2015)Techniques for Preserving Sci…An invariant framework for conducting reproducible computational science (2015)An invariant framework for co…A case study in preserving a high energy physics application with Parrot (2015)A case study in preserving a …Reproducible Software Appliances for Experimentation (2014)Reproducible Software Applian…ReproZip: using provenance to support computational reproducibility (2013)ReproZip: using provenance to…Virtual Appliances, Cloud Computing, and Reproducible Research (2012)Virtual Appliances, Cloud Com…Making Computations and Publications Reproducible with VisTrails (2012)Making Computations and Publi…Statistical Analyses and Reproducible Research (2007)Statistical Analyses and Repr…A survey of data provenance in e-science (2005)A survey of data provenance i…DSpace as an Open Archival Information System: Current Status and Future Directions (2003)DSpace as an Open Archival In…Guest Editors' Introduction: Reproducible Research (2008)Automated Capture of Experiment Context for Easier Reproducibility in Computational Research (2012)Computational reproducibility (2012)A Templating System to Generate Provenance (2017)noWorkflow (2017)Computational reproducibility of Jupyter notebooks from biomedical publications (2024)Provenance for Visualizations: Reproducibility and Beyond (2007)Provenance for Computational Tasks: A Survey (2008)Reproducible Research in Computational Harmonic Analysis (2008)A Minimum Standard for Publishing Computational Results in the Weather and Climate Sciences (2015)Embedding data provenance into the Learning Health System to facilitate reproducible research (2016)Reproducibility Using VisTrails (2018)From scientific software libraries to problem-solving environments (1996)Divorcing Language Dependencies from a Scientific Software Library. (2001)An introduction to Docker for reproducible research (2015)A framework for scientific workflow reproducibility in the cloud (2016)Report on the Third Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE3) (2016)Utilizing Provenance in Reusable Research Objects (2018)Scientific workflow management and the Kepler system (2005)Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv (2019)Successes and Struggles with Computational Reproducibility: Lessons from the Fragile Families Challenge (2019)Practical Reproducibility in Geography and Geosciences (2020)WaveLab and Reproducible Research (1995)Accessible Reproducible Research (2010)Computational Reproducibility in Archaeological Research: Basic Principles and a Case Study of Their Implementation (2016)Binder 2.0 - Reproducible, interactive, sharable environments for science at scale (2018)Galaxy: A platform for interactive large-scale genome analysis (2005)Why Most Published Research Findings Are False (2005)Promoting an open research culture (2015)Data Identification and Process Monitoring for Reproducible Earth Observation Research (2019)Evaluating Tools for Enhancing Reproducibility in Computational Scientific Experiments (2024)A framework for supporting the reproducibility of computational experiments in multiple scientific domains (2025)In silico research in the era of cloud computing (2010)Challenges of Large-Scale Biomedical Workflows on the Cloud -- A Case Study on the Need for Reproducibility of Results (2015)A survey of trust in computer science and the Semantic Web (2007)The Open Provenance Model core specification (v1.1) (2010)Exploring Variety in Digital Collections and the Implications for Digital Preservation (2005)Using the papers of contemporary British politicians as a testbed for the preservation of digital personal archives (2006)The D-NET software toolkit (2014)A collaborative approach to computational reproducibility (2016)
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References

  • 2005A survey of data provenance in e-science1,156 cited
  • 2007Statistical Analyses and Reproducible Research349 cited
  • 2013ReproZip: using provenance to support computational reproducibility91 cited
  • 2012Virtual Appliances, Cloud Computing, and Reproducible Research80 cited
  • 2012Making Computations and Publications Reproducible with VisTrails65 cited
  • 2003DSpace as an Open Archival Information System: Current Status and Future Directions58 cited
  • 2015An invariant framework for conducting reproducible computational science30 cited
  • 2017Repeatability and Benefaction in Computer Systems Research17 cited
  • 2016PRUNE: A preserving run environment for reproducible scientific computing14 cited
  • 2014Reproducible Software Appliances for Experimentation10 cited
  • 2015Techniques for Preserving Scientific Software Executions: Preserve the Mess or Encourage Cleanliness?9 cited
  • 2015A case study in preserving a high energy physics application with Parrot5 cited

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