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Create, run, share, publish, and reference your LC–MS, FIA–MS, GC–MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics
6 references·3 citing·19 second hop
Create, run, share, publish, and reference your LC–MS, FIA–MS, GC–MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics (2017)Create, run, share, publish, and referenc…A review of bioinformatic pipeline frameworks (2016)A review of bioinformatic pip…Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics (2014)Workflow4Metabolomics: a coll…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…KNIME: The Konstanz Information Miner (2008)KNIME: The Konstanz Informati…Taverna: a tool for building and running workflows of services (2006)Taverna: a tool for building …Galaxy: A platform for interactive large-scale genome analysis (2005)Galaxy: A platform for intera…Scientific workflow managers in metabolomics: an overview (2020)Scientific workflow managers …Improve your Galaxy text life: The Query Tabular Tool (2019)Improve your Galaxy text life…Improve your Galaxy text life: The Query Tabular Tool (2018)Improve your Galaxy text life…Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Characterization of scientific workflows (2008)The iPlant Collaborative: Cyberinfrastructure for Plant Biology (2011)Snakemake—a scalable bioinformatics workflow engine (2012)The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud (2013)Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities (2017)snakePipes: facilitating flexible, scalable and integrative epigenomic analysis (2019)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)Nextflow enables reproducible computational workflows (2017)Scientific workflows for bibliometrics (2016)Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers (2021)Sustainable data analysis with Snakemake (2021)PhenoMeNal: processing and analysis of metabolomics data in the cloud (2018)Scalable Data Analysis in Proteomics and Metabolomics Using BioContainers and Workflows Engines (2019)Toward collaborative open data science in metabolomics using Jupyter Notebooks and cloud computing (2019)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update (2022)
this work references cited by second hop

References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2005Galaxy: A platform for interactive large-scale genome analysis2,027 cited
  • 2008KNIME: The Konstanz Information Miner1,401 cited
  • 2006Taverna: a tool for building and running workflows of services944 cited
  • 2014Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics501 cited
  • 2016A review of bioinformatic pipeline frameworks250 cited

Cited by

  • 2020Scientific workflow managers in metabolomics: an overview17 cited
  • 2018Improve your Galaxy text life: The Query Tabular Tool10 cited
  • 2019Improve your Galaxy text life: The Query Tabular Tool9 cited

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