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Closha: bioinformatics workflow system for the analysis of massive sequencing data
4 references·3 citing·25 second hop
Closha: bioinformatics workflow system for the analysis of massive sequencing data (2018)Closha: bioinformatics workflow system fo…The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)The Galaxy platform for acces…Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support (2012)Tavaxy: Integrating Taverna a…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Taverna: a tool for the compo…Trecode: A FAIR Eco-System for the Analysis and Archiving of Omics Data in a Combined Diagnostic and Research Setting (2022)Trecode: A FAIR Eco-System fo…A Survey of Biological Data in a Big Data Perspective (2022)A Survey of Biological Data i…Bioinformatics Workflows With NoSQL Database in Cloud Computing (2019)Bioinformatics Workflows With…Workflow Patterns (2003)Galaxy: A platform for interactive large-scale genome analysis (2005)Capturing and querying workflow runtime provenance with PROV (2013)Dynamic steering of HPC scientific workflows: A survey (2014)Human Information Processing (2016)Scientific Workflows (2016)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)Nextflow enables reproducible computational workflows (2017)Computational solutions to large-scale data management and analysis (2010)Big Data: Astronomical or Genomical? (2015)The big challenges of big data (2013)Data-intensive applications, challenges, techniques and technologies: A survey on Big Data (2014)CREDO: a friendly Customizable, REproducible, DOcker file generator for bioinformatics applications (2024)Integrated data-driven biotechnology research environments (2025)Singularity: Scientific containers for mobility of compute (2017)Toil enables reproducible, open source, big biomedical data analyses (2017)MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians (2018)Taverna: a tool for building and running workflows of services (2006)Workflows and e-Science: An overview of workflow system features and capabilities (2008)Ten Simple Rules for Reproducible Computational Research (2013)What does research reproducibility mean? (2016)Bioconda: sustainable and comprehensive software distribution for the life sciences (2018)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)
this work references cited by second hop

References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2016The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update2,149 cited
  • 2004Taverna: a tool for the composition and enactment of bioinformatics workflows1,602 cited
  • 2012Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support120 cited

Cited by

  • 2022A Survey of Biological Data in a Big Data Perspective17 cited
  • 2019Bioinformatics Workflows With NoSQL Database in Cloud Computing11 cited
  • 2022Trecode: A FAIR Eco-System for the Analysis and Archiving of Omics Data in a Combined Diagnostic and Research Setting11 cited

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