SZodixStudyAcademic Library
ShelvesOpen access
Study · an open academic library·Metadata from OpenAlex (CC0)·Shelves·OpenAlex metadata, de-duplicated
A Serverless Tool for Platform Agnostic Computational Experiment Management
16 references·1 citing·42 second hop
A Serverless Tool for Platform Agnostic Computational Experiment Management (2019)A Serverless Tool for Platform Agnostic C…SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines (2019)SciPipe: A workflow library f…Replicability or reproducibility? On the replication crisis in computational neuroscience and sharing only relevant detail (2018)Replicability or reproducibil…Container-Based Clinical Solutions for Portable and Reproducible Image Analysis (2018)Container-Based Clinical Solu…Boutiques: a flexible framework to integrate command-line applications in computing platforms (2018)Boutiques: a flexible framewo…Toil enables reproducible, open source, big biomedical data analyses (2017)Toil enables reproducible, op…Singularity: Scientific containers for mobility of compute (2017)Singularity: Scientific conta…BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods (2017)BIDS apps: Improving ease of …ReproZip (2016)ReproZip1,500 scientists lift the lid on reproducibility (2016)1,500 scientists lift the lid…Estimating the reproducibility of psychological science (2015)Estimating the reproducibilit…OpenMOLE, a workflow engine specifically tailored for the distributed exploration of simulation models (2013)OpenMOLE, a workflow engine s…The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows (2012)The pipeline system for Octav…Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python (2011)Nipype: A Flexible, Lightweig…Neuroimaging Study Designs, Computational Analyses and Data Provenance Using the LONI Pipeline (2010)Neuroimaging Study Designs, C…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…The LONI Pipeline Processing Environment (2003)The LONI Pipeline Processing …Comparing perturbation models for evaluating stability of neuroimaging pipelines (2020)Comparing perturbation models…Why Most Published Research Findings Are False (2005)Conducting Meta-Analyses in R with the metafor Package (2010)Calculating and reporting effect sizes to facilitate cumulative science: a practical primer for t-tests and ANOVAs (2013)Estimating Psychological Networks and their Accuracy: A Tutorial Paper (2016)Redefine statistical significance (2017)A tutorial on regularized partial correlation networks. (2018)Child Maltreatment and Neural Systems Underlying Emotion Regulation (2015)How open science helps researchers succeed (2016)Beyond the 30-Million-Word Gap: Children’s Conversational Exposure Is Associated With Language-Related Brain Function (2018)Two new Later Stone Age sites from the Final Pleistocene in the Falémé Valley, eastern Senegal (2024)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Nextflow enables reproducible computational workflows (2017)A survey of data provenance in e-science (2005)Scientific workflow management and the Kepler system (2005)Taverna: lessons in creating a workflow environment for the life sciences (2005)Applications of the pipeline environment for visual informatics and genomics computations (2011)Virtual imaging laboratories for marker discovery in neurodegenerative diseases (2011)TheHiveDB image data management and analysis framework (2014)Provenance and scientific workflows (2008)Reproducible research in signal processing (2009)How scientists fool themselves – and how they can stop (2015)The Sacred Infrastructure for Computational Research (2017)Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv (2019)Reproducibility in machine‐learning‐based research: Overview, barriers, and drivers (2025)The iPlant Collaborative: Cyberinfrastructure for Plant Biology (2011)An Open Resource for Non-human Primate Imaging (2018)Clinica: An Open-Source Software Platform for Reproducible Clinical Neuroscience Studies (2021)Reproducibility in Neuroimaging Analysis: Challenges and Solutions (2022)Neural Correlates of Direct and Reflected Self-Appraisals in Adolescents and Adults: When Social Perspective-Taking Informs Self-Perception (2009)Social status modulates neural activity in the mentalizing network (2012)Tools and techniques for computational reproducibility (2016)A manifesto for reproducible science (2017)Bioconda: sustainable and comprehensive software distribution for the life sciences (2018)The nf-core framework for community-curated bioinformatics pipelines (2020)Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers (2021)Sustainable data analysis with Snakemake (2021)Methods included (2022)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)Sustainable data analysis with Snakemake (2021)
this work references cited by second hop

References

  • 2015Estimating the reproducibility of psychological science8,516 cited
  • 20161,500 scientists lift the lid on reproducibility4,200 cited
  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2017Singularity: Scientific containers for mobility of compute2,734 cited
  • 2011Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python2,202 cited
  • 2017Toil enables reproducible, open source, big biomedical data analyses1,362 cited
  • 2017BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods311 cited
  • 2003The LONI Pipeline Processing Environment310 cited
  • 2010Neuroimaging Study Designs, Computational Analyses and Data Provenance Using the LONI Pipeline135 cited
  • 2016ReproZip128 cited
  • 2013OpenMOLE, a workflow engine specifically tailored for the distributed exploration of simulation models123 cited
  • 2012The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows115 cited
  • 2018Replicability or reproducibility? On the replication crisis in computational neuroscience and sharing only relevant detail112 cited
  • 2018Boutiques: a flexible framework to integrate command-line applications in computing platforms

Only edges whose both ends are imported exist here. Widen the year window, or show the whole map. Back to the work

44 cited
  • 2019SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines43 cited
  • 2018Container-Based Clinical Solutions for Portable and Reproducible Image Analysis41 cited
  • Cited by

    • 2020Comparing perturbation models for evaluating stability of neuroimaging pipelines22 cited