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GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians
6 references·1 citing·25 second hop
GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians (2021)GalaxyTrakr: a distributed analysis tool …The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)The Galaxy platform for acces…Harnessing cloud computing with Galaxy Cloud (2011)Harnessing cloud computing wi…Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists (2010)Galaxy: A Web‐Based Genome An…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Mobyle: a new full web bioinformatics framework (2009)Mobyle: a new full web bioinf…Using Galaxy to Perform Large‐Scale Interactive Data Analyses (2007)Using Galaxy to Perform Large…Accelerating bioinformatics implementation in public health (2023)Accelerating bioinformatics i…Galaxy: A platform for interactive large-scale genome analysis (2005)Semantically-Guided Workflow Construction in Taverna: The SADI and BioMoby Plug-Ins (2010)Integrating diverse databases into an unified analysis framework: a Galaxy approach (2011)Bringing numerous methods for expression and promoter analysis to a public cloud computing service (2017)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Kepler: An Extensible System for Design and Execution of Scientific Workflows (2004)Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012)Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud (2015)Investigating reproducibility and tracking provenance – A genomic workflow case study (2017)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Singularity: Scientific containers for mobility of compute (2017)The nf-core framework for community-curated bioinformatics pipelines (2020)Sustainable data analysis with Snakemake (2021)Sustainable data analysis with Snakemake (2021)Snakemake—a scalable bioinformatics workflow engine (2012)Nextflow enables reproducible computational workflows (2017)Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers (2021)Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline (2014)Managing, Analysing, and Integrating Big Data in Medical Bioinformatics: Open Problems and Future Perspectives (2014)Towards reproducible computational drug discovery (2020)BioBlend: automating pipeline analyses within Galaxy and CloudMan (2013)Experiences building Globus Genomics: a next‐generation sequencing analysis service using Galaxy, Globus, and Amazon Web Services (2014)Data Lakes, Clouds, and Commons: A Review of Platforms for Analyzing and Sharing Genomic Data (2019)
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References

  • 2018The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update3,659 cited
  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2010Galaxy: A Web‐Based Genome Analysis Tool for Experimentalists1,430 cited
  • 2009Mobyle: a new full web bioinformatics framework310 cited
  • 2007Using Galaxy to Perform Large‐Scale Interactive Data Analyses143 cited
  • 2011Harnessing cloud computing with Galaxy Cloud114 cited

Cited by

  • 2023Accelerating bioinformatics implementation in public health26 cited

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