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Reproducibility as a service
16 references·1 citing·36 second hop
Reproducibility as a service (2023)Reproducibility as a serviceNotebook‐as‐a‐VRE (NaaVRE): From private notebooks to a collaborative cloud virtual research environment (2022)Notebook‐as‐a‐VRE (NaaVRE): F…A large-scale study on research code quality and execution (2022)A large-scale study on resear…The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing (2021)The targets R package: a dyna…Reproducibility and Replicability in Science (2019)Reproducibility and Replicabi…Open science challenges, benefits and tips in early career and beyond (2019)Open science challenges, bene…A Large-Scale Study About Quality and Reproducibility of Jupyter Notebooks (2019)A Large-Scale Study About Qua…Computing environments for reproducibility: Capturing the “Whole Tale” (2018)Computing environments for re…Singularity: Scientific containers for mobility of compute (2017)Singularity: Scientific conta…ReproZip (2016)ReproZipPositioning and Power in Academic Publishing: Players, Agents and Agendas (2016)Positioning and Power in Acad…How open science helps researchers succeed (2016)How open science helps resear…1,500 scientists lift the lid on reproducibility (2016)1,500 scientists lift the lid…noWorkflow: Capturing and Analyzing Provenance of Scripts (2015)noWorkflow: Capturing and Ana…Using provenance for repeatability (2013)Using provenance for repeatab…CDE: A Tool for Creating Portable Experimental Software Packages (2012)CDE: A Tool for Creating Port…The Limits of Reproducibility in Numerical Simulation (2011)The Limits of Reproducibility…Characterising reproducibility debt in scientific software: A systematic literature review (2024)Characterising reproducibilit…Free online availability substantially increases a paper's impact (2001)Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python (2011)Who's Afraid of Peer Review? (2013)Open Science now: A systematic literature review for an integrated definition (2018)Web of Science (WoS) and Scopus: The Titans of Bibliographic Information in Today’s Academic World (2021)Scientific workflow management and the Kepler system (2005)Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Promoting an open research culture (2015)Reproducibility and replicability: opportunities and challenges for geospatial research (2020)Ten simple rules for writing Dockerfiles for reproducible data science (2020)Traceability for Trustworthy AI: A Review of Models and Tools (2021)Jupyter Notebooks – a publishing format for reproducible computational workflows (2016)A manifesto for reproducible science (2017)The Hong Kong Principles for assessing researchers: Fostering research integrity (2020)Preferred reporting items for systematic reviews and meta‐analyses in ecology and evolutionary biology: a PRISMA extension (2021)The past, present and future of Registered Reports (2021)Provenance for Computational Tasks: A Survey (2008)Best Practices for Scientific Computing (2014)Assessing and restoring reproducibility of Jupyter notebooks (2020)Provenance and scientific workflows (2008)Ten Simple Rules for Reproducible Computational Research (2013)The dire disregard of measurement invariance testing in psychological science. (2023)Mapping the landscape and roadmap of geospatial artificial intelligence (GeoAI) in quantitative human geography: An extensive systematic review (2024)Bioconda: sustainable and comprehensive software distribution for the life sciences (2018)The nf-core framework for community-curated bioinformatics pipelines (2020)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)Sustainable data analysis with Snakemake (2021)KBase: The United States Department of Energy Systems Biology Knowledgebase (2018)Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (2019)Topic Modeling in Management Research: Rendering New Theory from Textual Data (2019)Challenges for assessing replicability in preclinical cancer biology (2021)Replicability, Robustness, and Reproducibility in Psychological Science (2021)Prevalence of questionable research practices, research misconduct and their potential explanatory factors: A survey among academic researchers in The Netherlands (2022)Implementing code review in the scientific workflow: Insights from ecology and evolutionary biology (2023)The five pillars of computational reproducibility: bioinformatics and beyond (2023)Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology (2025)
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References

  • 20161,500 scientists lift the lid on reproducibility4,200 cited
  • 2017Singularity: Scientific containers for mobility of compute2,734 cited
  • 2016Positioning and Power in Academic Publishing: Players, Agents and Agendas935 cited
  • 2019Reproducibility and Replicability in Science921 cited
  • 2016How open science helps researchers succeed790 cited
  • 2019Open science challenges, benefits and tips in early career and beyond605 cited
  • 2019A Large-Scale Study About Quality and Reproducibility of Jupyter Notebooks257 cited
  • 2021The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing238 cited
  • 2022A large-scale study on research code quality and execution136 cited
  • 2018Computing environments for reproducibility: Capturing the “Whole Tale”132 cited
  • 2015noWorkflow: Capturing and Analyzing Provenance of Scripts129 cited
  • 2016ReproZip128 cited
  • 2012CDE: A Tool for Creating Portable Experimental Software Packages37 cited
  • 2013Using provenance for repeatability34 cited
  • 2022Notebook‐as‐a‐VRE (NaaVRE): From private notebooks to a collaborative cloud virtual research environment

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31 cited
  • 2011The Limits of Reproducibility in Numerical Simulation26 cited
  • Cited by

    • 2024Characterising reproducibility debt in scientific software: A systematic literature review9 cited