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Empowering AI data scientists using a multi-agent LLM framework with self-evolving capabilities for autonomous, tool-aware biomedical data analyses
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Empowering AI data scientists using a multi-agent LLM framework with self-evolving capabilities for autonomous, tool-aware biomedical data analyses (2026)Empowering AI data scientists using a mul…BioMaster: Multi-agent system for automated bioinformatics analysis workflow (2026)BioMaster: Multi-agent system…BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow (2024)BioInformatics Agent (BIA): U…An AI Agent for Fully Automated Multi‐Omic Analyses (2024)An AI Agent for Fully Automat…Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers (2021)Reproducible, scalable, and s…Axes of a revolution: challenges and promises of big data in healthcare (2020)Axes of a revolution: challen…Nextflow enables reproducible computational workflows (2017)Nextflow enables reproducible…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Snakemake—a scalable bioinformatics workflow engine (2012)Reproducibility: A tragedy of errors (2016)Sustainable data analysis with Snakemake (2021)The EMBL-EBI Job Dispatcher sequence analysis tools framework in 2024 (2024)The Preamble of the Constitution of the World Health Organization. (2002)To Explain or to Predict? (2010)Modifiable risk factors, cardiovascular disease, and mortality in 155 722 individuals from 21 high-income, middle-income, and low-income countries (PURE): a prospective cohort study (2019)Applications of big data in emerging management disciplines: A literature review using text mining (2021)Tackling post-pandemic challenges with digital technologies: an empirical study (2021)Exploring the Intersection of Machine Learning and Big Data: A Survey (2025)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018)The nf-core framework for community-curated bioinformatics pipelines (2020)Spatial machine learning: new opportunities for regional science (2021)Empowering bioinformatics communities with Nextflow and nf-core (2025)Distributing Accountability, Not Capability: Phase Separation and the LLM Workflow Quadrant in Autonomous AI Agent Architectures (2022)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update (2022)Leveraging large language models for data analysis automation (2025)Streamline automated biomedical discoveries with agentic bioinformatics (2025)PromptBio: A Multi-Agent AI Platform for Bioinformatics Data Analysis (2025)
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References

  • 2017Nextflow enables reproducible computational workflows3,985 cited
  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2020Axes of a revolution: challenges and promises of big data in healthcare370 cited
  • 2021Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers228 cited
  • 2024An AI Agent for Fully Automated Multi‐Omic Analyses89 cited
  • 2026BioMaster: Multi-agent system for automated bioinformatics analysis workflow18 cited
  • 2024BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow18 cited

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