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OWL-DL Domain-Models as Abstract Workflows
14 references·0 citing·41 second hop
OWL-DL Domain-Models as Abstract Workflows (2012)OWL-DL Domain-Models as Abstract WorkflowsMaking data analysis expertise broadly accessible through workflows (2011)Making data analysis expertis…A new approach for publishing workflows (2011)A new approach for publishing…Wings: Intelligent Workflow-Based Design of Computational Experiments (2010)Wings: Intelligent Workflow-B…Synthesis-Based Loose Programming (2010)Synthesis-Based Loose Program…myExperiment: a repository and social network for the sharing of bioinformatics workflows (2010)myExperiment: a repository an…Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010)Galaxy: a comprehensive appro…Expressive Reusable Workflow Templates (2009)Expressive Reusable Workflow …Workflow re-use and discovery in bioinformatics (2008)Workflow re-use and discovery…Interoperability With Moby 1.0 - It's Better Than Sharing Your Toothbrush! (2008)Interoperability With Moby 1.…DECLARE: Full Support for Loosely-Structured Processes (2007)DECLARE: Full Support for Loo…Seven Bottlenecks to Workflow Reuse and Repurposing (2005)Seven Bottlenecks to Workflow…Taverna: a tool for the composition and enactment of bioinformatics workflows (2004)Taverna: a tool for the compo…Applying KAoS Services to Ensure Policy Compliance for Semantic Web Services Workflow Composition and Enactment (2004)Applying KAoS Services to Ens…BioMOBY: An open source biological web services proposal (2002)BioMOBY: An open source biolo…The Process Specification Language (PSL) Overview and Version 1.0 Specification (1999)The Process Specification Language (PSL) overview and version 1.0 specification (2000)Towards a Model of Provenance and User Views in Scientific Workflows (2006)Defining Process Performance Indicators: An Ontological Approach (2010)Semantics-based composition of EMBOSS services (2011)Workflow Patterns (2003)Kepler: An Extensible System for Design and Execution of Scientific Workflows (2004)Workflow mining: discovering process models from event logs (2004)Enabling ScientificWorkflow Reuse through Structured Composition of Dataflow and Control-Flow (2006)Workflow discovery: the problem, a case study from e-Science and a graph-based solution (2006)Data curation + process curation=data integration + science (2008)Examining the Challenges of Scientific Workflows (2007)The design and realisation of the Virtual Research Environment for social sharing of workflows (2008)The Open Provenance Model core specification (v1.1) (2010)Augmenting PROV with Plans in P-PLAN: Scientific Processes as Linked Data (2012)D-PROV: extending the PROV provenance model with workflow structure (2013)Recording provenance of workflow runs with RO-Crate (2024)An overview of workflow management: From process modeling to workflow automation infrastructure (1995)Workflow mining: A survey of issues and approaches (2003)Declarative workflows: Balancing between flexibility and support (2009)Time prediction based on process mining (2010)Automated Discovery of Process Models from Event Logs: Review and Benchmark (2018)Taverna: a tool for building and running workflows of services (2006)Similarity assessment and efficient retrieval of semantic workflows (2012)Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome (2013)Using a suite of ontologies for preserving workflow-centric research objects (2015)Design Patterns: Elements of Reusable Object-Oriented Software (1994)Bioconductor: open software development for computational biology and bioinformatics (2004)Snakemake—a scalable bioinformatics workflow engine (2012)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Nextflow enables reproducible computational workflows (2017)Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges (2008)BioCatalogue: a universal catalogue of web services for the life sciences (2010)Tavaxy: Integrating Taverna and Galaxy workflows with cloud computing support (2012)Scientific workflows for bibliometrics (2016)Scientific workflows: Past, present and future (2017)Workflows and e-Science: An overview of workflow system features and capabilities (2008)Ten Simple Rules for Reproducible Computational Research (2013)Bringing Web 2.0 to bioinformatics (2008)Bio-jETI: a framework for semantics-based service composition (2009)BioExcel Building Blocks, a software library for interoperable biomolecular simulation workflows (2019)
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References

  • 2010Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences3,455 cited
  • 2004Taverna: a tool for the composition and enactment of bioinformatics workflows1,602 cited
  • 2004Applying KAoS Services to Ensure Policy Compliance for Semantic Web Services Workflow Composition and Enactment585 cited
  • 2007DECLARE: Full Support for Loosely-Structured Processes583 cited
  • 2002BioMOBY: An open source biological web services proposal351 cited
  • 2010myExperiment: a repository and social network for the sharing of bioinformatics workflows299 cited
  • 2010Wings: Intelligent Workflow-Based Design of Computational Experiments201 cited
  • 2008Interoperability With Moby 1.0 - It's Better Than Sharing Your Toothbrush!110 cited
  • 2005Seven Bottlenecks to Workflow Reuse and Repurposing82 cited
  • 2011A new approach for publishing workflows78 cited
  • 2010Synthesis-Based Loose Programming57 cited
  • 2009Expressive Reusable Workflow Templates29 cited
  • 2011Making data analysis expertise broadly accessible through workflows19 cited
  • 2008Workflow re-use and discovery in bioinformatics11 cited

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