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Software simplified
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Software simplified (2017)Software simplifiedPackaging and containerization of computational methods (2024)Packaging and containerizatio…Toward practical transparent verifiable and long-term reproducible research using Guix (2022)Toward practical transparent …Hot-starting software containers for STAR aligner (2018)Hot-starting software contain…Tools and techniques for computational reproducibility (2016)Singularity: Scientific containers for mobility of compute (2017)Toil enables reproducible, open source, big biomedical data analyses (2017)1,500 scientists lift the lid on reproducibility (2016)The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016)Automatic Reproduction of Workflows in the Snakemake Workflow Catalog and nf-core Registries (2023)Source Code Archiving to the Rescue of Reproducible Deployment (2024)Bioconductor: open software development for computational biology and bioinformatics (2004)A how-to guide for code sharing in biology (2024)Autonomous Self‐Evolving Research on Biomedical Data: The DREAM Paradigm (2025)
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  • 2024Packaging and containerization of computational methods24 cited
  • 2022Toward practical transparent verifiable and long-term reproducible research using Guix16 cited
  • 2018Hot-starting software containers for STAR aligner9 cited

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